table of contents
CM_TO_WIGEON(1) | User Commands | CM_TO_WIGEON(1) |
NAME¶
cm_to_wigeon - helper for wigeon (Pintail 16S DNA anomaly detection)
DESCRIPTION¶
Unfortunately this tools that comes in connection with wigeon(1) is not documented but it regards the options below. If you know better about its purpose please drop us a note using reportbug on your Debian system.
OPTIONS¶
Required:¶
- --query_NAST
- multi-fasta file containing query sequences in alignment format
- --db_NAST
- db in NAST format
- --db_FASTA
- db in fasta format (megablast formatted)
Common options¶
Parameters to tune ChimeraMaligner:¶
Scoring parameters:
Flags:¶
- --printAlignments
- (default off)
- -v
- verbose
- --exec_dir
- cd here before running
SEE ALSO¶
AUTHOR¶
This manual page was written by Andreas Tille <tille@debian.org> but can be freely used for any other distribution.
June 2013 | cm_to_wigeon |