table of contents
| VORONOTA-VOLUMES(1) | User Commands | VORONOTA-VOLUMES(1) |
NAME¶
voronota-volumes - manual page for voronota-volumes 1.22.3149
DESCRIPTION¶
'voronota-volumes' script provides a way for calculating and querying atomic volumes with just one command (without the need to construct a pipeline from 'voronota' calls).
Basic options:¶
- --input | -i
- string * input structure file in PDB or mmCIF format
- --input-filter-query
- string input atoms filtering query parameters
- --cache-dir
- string path to cache directory
- --sum-at-end
- flag to print sum of areas as the last line in output
- --help | -h
- flag to display help message and exit
Advanced options:¶
- --atoms-query
- string atoms query parameters
- --per-residue
- flag to output per-residue results
- --multiple-models
- flag to handle multiple models in PDB file
Standard output (multiple lines):¶
- {name} {volume}
| October 2022 | voronota-volumes 1.22.3149 |