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QCAT-EVAL-TRUTH(1) User Commands QCAT-EVAL-TRUTH(1)

NAME

qcat-eval-truth - Command line interface to barcode detection library

DESCRIPTION

WARNING:root:Could not load pysam. To use qcat-eval-full please install mappy. usage: qcat-eval-truth [-h] -t TSV -n NAME -g GENOMES [--max MAX] [FASTQ]

Command line interface to barcode detection library

positional arguments:

FASTQ

options:

show this help message and exit

-t TSV, --tsv TSV

-n NAME, --name NAME

-g GENOMES, --genomes GENOMES

--max MAX

November 2022 qcat-eval-truth 1.1.0