.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.2.
.TH GRAPHDUMP "1" "September 2022" "graphdump 1.0.0" "User Commands"
.SH NAME
graphdump \- build the compacted de Bruijn graph from many complete genomes
.SH DESCRIPTION
USAGE:
.TP
graphdump
\fB\-k\fR <integer> [\-s <>] ... \fB\-f\fR <seq|group|dot|gfa1|gfa2|fasta>
[\-\-prefix] [\-\-] [\-\-version] [\-h] <file name>
.PP
Where:
.HP
\fB\-k\fR <integer>,  \fB\-\-kvalue\fR <integer>
.TP
(required)
Value of k
.TP
\fB\-s\fR <>,  \fB\-\-seqfile\fR <>
(accepted multiple times)
.IP
sequences file name
.HP
\fB\-f\fR <seq|group|dot|gfa1|gfa2|fasta>,  \fB\-\-format\fR <seq|group|dot|gfa1|gfa2
.IP
|fasta>
.TP
(required)
Output format
.HP
\fB\-\-prefix\fR
.IP
Add a prefix to segments in GFA (in case if you have genomes with
identical FASTA headers)
.HP
\fB\-\-\fR,  \fB\-\-ignore_rest\fR
.IP
Ignores the rest of the labeled arguments following this flag.
.HP
\fB\-\-version\fR
.IP
Displays version information and exits.
.HP
\fB\-h\fR,  \fB\-\-help\fR
.IP
Displays usage information and exits.
.IP
<file name>
.TP
(required)
input file name
.IP
This utility converts the binary output of TwoPaCo to another format
.SH AUTHOR
 This manpage was written by Andrius Merkys for the Debian distribution and
 can be used for any other usage of the program.