.\" DO NOT MODIFY THIS FILE!  It was generated by help2man 1.49.3.
.TH CDKDEPICT "1" "February 2023" "cdkdepict version 0.2.0" "User Commands"
.SH NAME
cdkdepict \- draw SVG image for SMILES
.SH DESCRIPTION
Depict molecules given as SMILES strings in
SVG, PDF PS (PostScript) or EPS (Encapsulated PS)
formats.
.PP
USAGE
.IP
cdkdepict < input.smi
cdkdepict inputs*.smi
.SS "OPTIONS:"
.HP
\fB\-a\fR, \fB\-\-auto\-kekulise\fR
.IP
Attempt to "kekulise" aromatic smiles, switch to non\-kekulised
representation if kekulisation fails (default)
.HP
\fB\-k\fR, \fB\-\-kekulise\fR
.IP
Always "kekulise" aromatic smiles
.HP
\fB\-k\-\fR, \fB\-\-dont\-kekulise\fR, \fB\-\-do\-not\-kekulise\fR
.IP
Do not "kekulise" aromatic smiles, leave input as it is
.HP
\fB\-\-smiles\fR c1ccccc1
.IP
Specify SMILES string to depict instead of reading input files
.HP
\fB\-S\fR, \fB\-\-svg\-output\fR Produce SVG output
.HP
\fB\-E\fR, \fB\-\-eps\-output\fR Produce EPS output
.HP
\fB\-P\fR, \fB\-\-pdf\-output\fR Produce PDF output
.HP
\fB\-\-supported\-formats\fR
.IP
List formats supported for a given input
.TP
\fB\-\-version\fR
Print program version and exit
.TP
\fB\-\-help\fR
Print short help message (this message) and exit